Organelles & Their Functions
Application Paper (Level 4)
Time limit: 60 minutes Total marks: 50 Instructions: Answer all questions. No hints are provided. Apply your understanding of organelle structure and function to the novel scenarios described.
Question 1 (10 marks)
A pharmaceutical company engineers a mammalian cell line to mass-produce and secrete a therapeutic antibody protein (a large glycoprotein).
(a) Trace the complete pathway of this antibody from the site where its polypeptide is synthesised to its release from the cell. Name every organelle/membrane structure it passes through, in order. (5)
(b) A mutation disables the enzyme that adds carbohydrate groups to proteins in one specific organelle, yet ribosomal synthesis still occurs. State which organelle's modification would be lost and predict two consequences for the antibody. (3)
(c) Explain why a cell specialised for heavy antibody secretion would contain far more rough ER than a resting cell. (2)
Question 2 (10 marks)
Two unknown cell samples are examined under an electron microscope:
- Sample X: contains a cell wall, large central vacuole, chloroplasts, and mitochondria.
- Sample Y: lacks a cell wall and chloroplasts but is packed with mitochondria and has many small vesicles containing hydrolytic enzymes.
(a) Identify the most likely origin (plant or animal) of each sample, justifying each with two pieces of evidence. (4)
(b) Sample Y's cells are muscle cells. Explain the link between their high mitochondrial count and their function. (3)
(c) The vesicles of hydrolytic enzymes in Sample Y suddenly rupture inside a cell. Predict and explain the outcome for that cell. (3)
Question 3 (10 marks)
A drug called colchicine binds to tubulin and prevents microtubules from assembling.
(a) Predict three distinct cellular processes or structures that would be disrupted by colchicine, giving a reason for each. (6)
(b) A patient's respiratory cilia fail to beat after taking a related drug. Using the "9+2" arrangement, explain the structural basis of ciliary movement and why disrupting microtubules stops beating. (4)
Question 4 (10 marks)
A researcher isolates a novel single-celled organism. Under stress (starvation), the cell begins to digest portions of its own cytoplasm, including damaged mitochondria, to recycle nutrients.
(a) Name this process and the organelle centrally responsible for it. Describe the step-by-step mechanism by which a damaged mitochondrion is degraded. (5)
(b) The organism also carries out reactions that break down fatty acids and neutralise hydrogen peroxide (). Name the organelle responsible and write the balanced equation for the reaction that removes . (3)
(c) Explain why must be broken down rapidly and why compartmentalising this reaction is advantageous. (2)
Question 5 (10 marks)
The table shows features of two organelles believed to have arisen by endosymbiosis:
| Feature | Organelle A | Organelle B |
|---|---|---|
| Inner membrane folds | cristae | thylakoids/grana |
| Main product | ATP | glucose + |
| Pigment present | none | chlorophyll |
(a) Identify Organelle A and Organelle B. (2)
(b) State three pieces of evidence that support the endosymbiotic origin of these organelles. (3)
(c) A plant cell in the dark cannot photosynthesise. Explain how it still obtains ATP, and describe the direct metabolic relationship between Organelle A and Organelle B in a leaf cell during daylight. (5)
Answer keyMark scheme & solutions
Question 1 (10 marks)
(a) Secretory pathway (5 marks — 1 per correct structure in order):
- Ribosomes on rough ER — polypeptide synthesised and threaded into ER lumen.
- Rough endoplasmic reticulum — folding + initial glycosylation.
- Transport (transition) vesicles — bud off ER, carry protein.
- Golgi apparatus (cis → trans) — further modification/glycosylation, sorting, packaging.
- Secretory vesicles → plasma membrane — exocytosis releases antibody.
Why: This is the endomembrane system protein pathway; a secreted glycoprotein must be membrane-bound throughout, never free in cytosol.
(b) (3 marks):
- Organelle: Golgi apparatus (site of most carbohydrate addition/completion) — (1)
- Consequences (any 2 × 1): antibody would be incompletely/incorrectly glycosylated; misfolded / non-functional / unstable; possibly not properly sorted or secreted / degraded.
(c) (2 marks): Rough ER is the site of synthesis of secreted proteins (1); a high-secretion cell needs vast ribosome/ER capacity to meet demand, so rough ER is extensively developed (1).
Question 2 (10 marks)
(a) (4 marks):
- Sample X = plant — evidence: cell wall + large central vacuole + chloroplasts (any 2 × 1). (2)
- Sample Y = animal — evidence: no cell wall + no chloroplasts + many lysosomes (small hydrolytic vesicles) (any 2 × 1). (2)
(b) (3 marks): Muscle cells do mechanical work (contraction) requiring large amounts of ATP (1). Mitochondria are the site of aerobic respiration / oxidative phosphorylation producing ATP (1). More mitochondria = greater ATP supply to sustain repeated contraction (1).
(c) (3 marks): The vesicles are lysosomes containing hydrolytic enzymes (1). Rupture releases enzymes into the cytoplasm (1), which digest the cell's own components → autolysis / cell death (1).
Question 3 (10 marks)
(a) (6 marks — 3 × [process + reason]): Any three of:
- Mitotic spindle formation — spindle is made of microtubules; chromosome separation fails → cell cycle arrest. (2)
- Intracellular vesicle/organelle transport — microtubules are tracks for motor proteins; transport disrupted. (2)
- Cell shape / structural support — microtubules form part of cytoskeleton; shape collapses. (2)
- Cilia/flagella movement — axoneme is microtubule-based; motility lost. (2)
- Centriole/centrosome function — organise microtubules; MTOC disrupted. (2)
(b) (4 marks): Cilium axoneme has nine outer microtubule doublets surrounding two central single microtubules (9+2) (1). Dynein motor arms on doublets use ATP to make adjacent doublets slide past one another (1); because doublets are anchored, sliding is converted to bending/beating (1). Disrupting microtubule assembly destroys the axoneme so no sliding/bending occurs → cilia cannot beat (1).
Question 4 (10 marks)
(a) (5 marks):
- Process: autophagy (1); organelle: lysosome (1).
- Mechanism (3 × 1): damaged mitochondrion enclosed in a double membrane forming an autophagosome → autophagosome fuses with a lysosome → lysosomal hydrolytic enzymes digest the contents → breakdown products (amino acids, etc.) released to cytoplasm for reuse.
(b) (3 marks):
- Organelle: peroxisome (1).
- Enzyme: catalase; balanced equation (2):
(c) (2 marks): is a toxic reactive oxygen species that damages proteins/lipids/DNA, so must be removed fast (1). Compartmentalising the reaction in peroxisomes keeps the toxic intermediate and reaction isolated from the rest of the cell, protecting other components (1).
Question 5 (10 marks)
(a) (2 marks): A = mitochondrion (1); B = chloroplast (1).
(b) (3 marks — any 3 × 1): own circular DNA; own 70S (bacterial-type) ribosomes; double membrane; divide by binary fission independently; size similar to bacteria.
(c) (5 marks):
- In the dark, no photosynthesis, but the cell still respires (1): glucose (stored/imported) is broken down in the mitochondrion via aerobic respiration to make ATP (1).
- In daylight relationship (3): chloroplast produces glucose and by photosynthesis (1); mitochondrion uses glucose and as substrates for respiration (1); mitochondrion releases and which the chloroplast reuses for photosynthesis — a cyclic exchange of gases/substrates (1).
[
{"claim":"Catalase decomposition of hydrogen peroxide is balanced: 2H2O2 -> 2H2O + O2",
"code":"H,O=symbols('H O'); left={H:2*2, O:2*2}; right={H:2*2, O:2*1+2}; result=(left[H]==right[H] and left[O]==right[O])"},
{"claim":"Q1 marks sum to 10",
"code":"result=(5+3+2==10)"},
{"claim":"Total paper marks equal 50",
"code":"result=(10+10+10+10+10==50)"},
{"claim":"Q5 part marks sum to 10",
"code":"result=(2+3+5==10)"}
]